Four new tyres (Eagle F1s) after the front Pirellis wore out on the outside edge (down to the carcass (turned out that the tracking was out by 16.5 degrees!) and then a few weeks later a blow out on the rear offside meant the rears needed replacing too

So sorted all that out and now there are engine problems. Car is fine under normal driving until you floor it or even accelerate moderately fast. The symptoms are that the acceleration is hesitant with loss of power and then it comes back on tap in stops and starts.
At first I assumed it was a fuel starvation issue, but running injector cleaner through the system and several full tanks of Optimax have not cleared it. Then I suspected a turbo/airflow related issue and a vacuum leak.
Replaced the main hose and the two intercooler pipes with Samco jobs and put in a Forge DV. This seemed to make it better, but the fault was still there. Not long after one of the speed sensors went on the front nearside front wheel so it went into the dealer to get that fixed (ABS and ESP warning lights had come on).
Dealer spend two hours looking into engine problem. They cannot see anything obvious. Diagnostics check reveals it is pulling more air in than normal so they suspect that it is a vacuum related problem. Turbo is fine, no other errors came up on the VAGCom or what ever else it is they use to check such things.
The head technician *thinks* that it could be a brake servo vacuum leak. He said this is a common fault in S3s but I had not heard of this before? Anyone else had this issue?
His only other hint to this is that the brake perdal feels 'spongier' than it should. I'm not sure why/how the brake system works off the same vacuum system as the engine, but that is what they're implying.
Proposed solution is that the car goes back into the dealer for further tests at the diagnostic labour rate £85 per hour. They will need to get the car up on the ramp drop the engine out and test it fully. if the brake servo is the suspected fault replacement is £300 for the part and the associated labour. Probably looking at £1000 all in.
Any comments suggestions welcomed...